EVOLUTION-MANAGER

Edit File: test_file2.py

# This file is part of h5py, a Python interface to the HDF5 library.
#
# http://www.h5py.org
#
# Copyright 2008-2013 Andrew Collette and contributors
#
# License:  Standard 3-clause BSD; see "license.txt" for full license terms
#           and contributor agreement.

"""
    Tests the h5py.File object.
"""

from __future__ import absolute_import

import h5py
from h5py._hl.files import _drivers

from .common import ut, TestCase

import io
import tempfile
import os

def nfiles():
    return h5py.h5f.get_obj_count(h5py.h5f.OBJ_ALL, h5py.h5f.OBJ_FILE)

def ngroups():
    return h5py.h5f.get_obj_count(h5py.h5f.OBJ_ALL, h5py.h5f.OBJ_GROUP)

class TestDealloc(TestCase):

"""
        Behavior on object deallocation.  Note most of this behavior is
        delegated to FileID.
    """

def test_autoclose(self):
        """ File objects close automatically when out of scope, but
        other objects remain open. """

start_nfiles = nfiles()
        start_ngroups = ngroups()

fname = self.mktemp()
        f = h5py.File(fname, 'w')
        g = f['/']

self.assertEqual(nfiles(), start_nfiles+1)
        self.assertEqual(ngroups(), start_ngroups+1)

del f

self.assertTrue(g)
        self.assertEqual(nfiles(), start_nfiles)
        self.assertEqual(ngroups(), start_ngroups+1)

f = g.file

self.assertTrue(f)
        self.assertEqual(nfiles(), start_nfiles+1)
        self.assertEqual(ngroups(), start_ngroups+1)

del g

self.assertEqual(nfiles(), start_nfiles+1)
        self.assertEqual(ngroups(), start_ngroups)

del f

self.assertEqual(nfiles(), start_nfiles)
        self.assertEqual(ngroups(), start_ngroups)

class TestDriverRegistration(TestCase):
    def test_register_driver(self):
        called_with = [None]

def set_fapl(plist, *args, **kwargs):
            called_with[0] = args, kwargs
            return _drivers['sec2'](plist)

h5py.register_driver('new-driver', set_fapl)
        self.assertIn('new-driver', h5py.registered_drivers())

fname = self.mktemp()
        h5py.File(fname, driver='new-driver', driver_arg_0=0, driver_arg_1=1,
                  mode='w')

self.assertEqual(
            called_with,
            [((), {'driver_arg_0': 0, 'driver_arg_1': 1})],
        )

def test_unregister_driver(self):
        h5py.register_driver('new-driver', lambda plist: None)
        self.assertIn('new-driver', h5py.registered_drivers())

h5py.unregister_driver('new-driver')
        self.assertNotIn('new-driver', h5py.registered_drivers())

with self.assertRaises(ValueError) as e:
            fname = self.mktemp()
            h5py.File(fname, driver='new-driver', mode='w')

self.assertEqual(str(e.exception), 'Unknown driver type "new-driver"')

class TestCache(TestCase):
    def test_defaults(self):
        fname = self.mktemp()
        f = h5py.File(fname, 'w')
        self.assertEqual(list(f.id.get_access_plist().get_cache()),
                         [0, 521, 1048576, 0.75])

def test_nbytes(self):
        fname = self.mktemp()
        f = h5py.File(fname, 'w', rdcc_nbytes=1024)
        self.assertEqual(list(f.id.get_access_plist().get_cache()),
                         [0, 521, 1024, 0.75])

def test_nslots(self):
        fname = self.mktemp()
        f = h5py.File(fname, 'w', rdcc_nslots=125)
        self.assertEqual(list(f.id.get_access_plist().get_cache()),
                         [0, 125, 1048576, 0.75])

def test_w0(self):
        fname = self.mktemp()
        f = h5py.File(fname, 'w', rdcc_w0=0.25)
        self.assertEqual(list(f.id.get_access_plist().get_cache()),
                         [0, 521, 1048576, 0.25])

class TestFileObj(TestCase):

def check_write(self, fileobj):
        f = h5py.File(fileobj, 'w')
        self.assertEqual(f.driver, 'fileobj')
        self.assertEqual(f.filename, repr(fileobj))
        f.create_dataset('test', data=list(range(12)))
        self.assertEqual(list(f), ['test'])
        self.assertEqual(list(f['test'][:]), list(range(12)))
        f.close()

def check_read(self, fileobj):
        f = h5py.File(fileobj, 'r')
        self.assertEqual(list(f), ['test'])
        self.assertEqual(list(f['test'][:]), list(range(12)))
        self.assertRaises(Exception, f.create_dataset, 'another.test', data=list(range(3)))
        f.close()

def test_BytesIO(self):
        with io.BytesIO() as fileobj:
            self.assertEqual(len(fileobj.getvalue()), 0)
            self.check_write(fileobj)
            self.assertGreater(len(fileobj.getvalue()), 0)
            self.check_read(fileobj)

def test_file(self):
        fname = self.mktemp()
        try:
            with open(fname, 'wb+') as fileobj:
                self.assertEqual(os.path.getsize(fname), 0)
                self.check_write(fileobj)
                self.assertGreater(os.path.getsize(fname), 0)
                self.check_read(fileobj)
            with open(fname, 'rb') as fileobj:
                self.check_read(fileobj)
        finally:
            os.remove(fname)

def test_TemporaryFile(self):
        # in this test, we check explicitly that temp file gets
        # automatically deleted upon h5py.File.close()...
        fileobj = tempfile.NamedTemporaryFile()
        fname = fileobj.name
        f = h5py.File(fileobj, 'w')
        del fileobj
        # ... but in your code feel free to simply
        # f = h5py.File(tempfile.TemporaryFile())

f.create_dataset('test', data=list(range(12)))
        self.assertEqual(list(f), ['test'])
        self.assertEqual(list(f['test'][:]), list(range(12)))
        self.assertTrue(os.path.isfile(fname))
        f.close()
        self.assertFalse(os.path.isfile(fname))

def test_exception_open(self):
        self.assertRaises(Exception, h5py.File, None,
                          driver='fileobj', mode='x')
        self.assertRaises(Exception, h5py.File, 'rogue',
                          driver='fileobj', mode='x')
        self.assertRaises(Exception, h5py.File, self,
                          driver='fileobj', mode='x')

def test_exception_read(self):

class BrokenBytesIO(io.BytesIO):
            def readinto(self, b):
                raise Exception('I am broken')

f = h5py.File(BrokenBytesIO(), 'w')
        f.create_dataset('test', data=list(range(12)))
        self.assertRaises(Exception, list, f['test'])

def test_exception_write(self):

class BrokenBytesIO(io.BytesIO):
            def write(self, b):
                raise Exception('I am broken')

f = h5py.File(BrokenBytesIO(), 'w')
        self.assertRaises(Exception, f.create_dataset, 'test',
                          data=list(range(12)))
        self.assertRaises(Exception, f.close)

def test_exception_close(self):
        fileobj = io.BytesIO()
        f = h5py.File(fileobj, 'w')
        fileobj.close()
        self.assertRaises(Exception, f.close)

def test_method_vanish(self):
        fileobj = io.BytesIO()
        f = h5py.File(fileobj, 'w')
        f.create_dataset('test', data=list(range(12)))
        self.assertEqual(list(f['test'][:]), list(range(12)))
        fileobj.readinto = None
        self.assertRaises(Exception, list, f['test'])

class TestTrackOrder(TestCase):
    def populate(self, f):
        for i in range(100):
            # Mix group and dataset creation.
            if i % 10 == 0:
                f.create_group(str(i))
            else:
                f[str(i)] = [i]

def test_track_order(self):
        fname = self.mktemp()
        f = h5py.File(fname, 'w', track_order=True)  # creation order
        self.populate(f)
        self.assertEqual(list(f),
                         [str(i) for i in range(100)])

def test_no_track_order(self):
        fname = self.mktemp()
        f = h5py.File(fname, 'w', track_order=False)  # name alphanumeric
        self.populate(f)
        self.assertEqual(list(f),
                         sorted([str(i) for i in range(100)]))