EVOLUTION-MANAGER

Edit File: bibentry.html

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<table width="100%" summary="page for bibentry {utils}"><tr><td>bibentry {utils}</td><td style="text-align: right;">R Documentation</td></tr></table>

<h2>Bibliography Entries</h2>

<h3>Description</h3>

Functionality for representing and manipulating bibliographic
information in enhanced BibTeX style.

<h3>Usage</h3>

<pre>
bibentry(bibtype, textVersion = NULL, header = NULL, footer = NULL,
 key = NULL, ..., other = list(),
 mheader = NULL, mfooter = NULL)

## S3 method for class 'bibentry'
print(x, style = "text", .bibstyle, ...)

## S3 method for class 'bibentry'
format(x, style = "text", .bibstyle = NULL,
       citation.bibtex.max = getOption("citation.bibtex.max", 1),
       bibtex = length(x) &lt;= citation.bibtex.max,
       sort = FALSE, macros = NULL, ...)

## S3 method for class 'bibentry'
sort(x, decreasing = FALSE, .bibstyle = NULL, drop = FALSE, ...)

## S3 method for class 'citation'
print(x, style = "citation", ...)
## S3 method for class 'citation'
format(x, style = "citation", ...)
</pre>

<h3>Arguments</h3>

<table summary="R argblock">
<tr valign="top"><td><code>bibtype</code></td>
<td>
a character string with a BibTeX entry type.
See Entry Types for details.

</td></tr>
<tr valign="top"><td><code>textVersion</code></td>
<td>
a character string with a text representation of
the reference to optionally be employed for printing. It is
recommended to leave this unspecified if
<code>format(x, style = "text")</code>
works correctly. Only if special LaTeX macros (e.g., math
formatting) or special characters (e.g., with accents) are
necessary, a <code>textVersion</code> should be provided.

</td></tr>
<tr valign="top"><td><code>header</code></td>
<td>
a character string with optional header text.
</td></tr>
<tr valign="top"><td><code>footer</code></td>
<td>
a character string with optional footer text.
</td></tr>
<tr valign="top"><td><code>key</code></td>
<td>
a character string giving the citation key for the entry.
</td></tr>
<tr valign="top"><td><code>...</code></td>
<td>
for <code>bibentry</code>: arguments of the form
<code><var>tag</var>=<var>value</var></code> giving the fields of the entry, with
<var>tag</var> and <var>value</var> the name and value of the field,
respectively. Arguments with empty values are dropped.
See Entry Fields for details.

For the <code>print()</code> method, extra arguments to pass to the
renderer which typically includes the <code>format()</code> method.

For the <code>citation</code> class methods, arguments passed to the next
method, i.e., the corresponding <code>bibentry</code> one.

</td></tr>
<tr valign="top"><td><code>other</code></td>
<td>
a list of arguments as in <code>...</code> (useful in
particular for fields named the same as formals of
<code>bibentry</code>).
</td></tr>
<tr valign="top"><td><code>mheader</code></td>
<td>
a character string with optional &ldquo;outer&rdquo; header
text.
</td></tr>
<tr valign="top"><td><code>mfooter</code></td>
<td>
a character string with optional &ldquo;outer&rdquo; footer
text.
</td></tr>
<tr valign="top"><td><code>x</code></td>
<td>
an object inheriting from class <code>"bibentry"</code>.
</td></tr>
<tr valign="top"><td><code>style</code></td>
<td>
an optional character string specifying the print style.
If present, must be a unique abbreviation (with case ignored) of the available
styles, see Details.
</td></tr>
<tr valign="top"><td><code>decreasing</code></td>
<td>
logical, passed to <code><a href="../../base/html/order.html">order</a></code> indicating
the sort direction.
</td></tr>
<tr valign="top"><td><code>.bibstyle</code></td>
<td>
a character string naming a bibliography style.
</td></tr>
<tr valign="top"><td><code>citation.bibtex.max</code></td>
<td>
(deprecated, use
<code>bibtex = T|F</code>
instead!) a number, say m, indicating that the bibtex
code should be given in addition to the formatted tex when
there are not more than m entries. The default is taken as
<code><a href="../../base/html/options.html">getOption</a>("citation.bibtex.max", 1)</code> which is <code>1</code>
typically. For example, to see no bibtex at all, you can change the
default by <code><a href="../../base/html/options.html">options</a>(citation.bibtex.max = 0)</code>.
</td></tr>
<tr valign="top"><td><code>bibtex</code></td>
<td>
logical indicating if bibtex code should be given
additionally; currently applies only to <code>style = "citation"</code>.
The default depends on on the number of (bib) entries and
<code><a href="../../base/html/options.html">getOption</a>("citation.bibtex.max")</code>.
</td></tr>
<tr valign="top"><td><code>sort</code></td>
<td>
logical indicating if bibentries should be sorted, using
<code><a href="../../tools/html/bibstyle.html">bibstyle</a>(.bibstyle)$sortKeys(x)</code>.
</td></tr>
<tr valign="top"><td><code>macros</code></td>
<td>
a character string or an object with already loaded Rd
macros, see Details.
</td></tr>
<tr valign="top"><td><code>drop</code></td>
<td>
logical used as <code>x[ ..., drop=drop]</code> inside the
<code>sort()</code> method.
</td></tr>
</table>

<h3>Details</h3>

The bibentry objects created by <code>bibentry</code> can represent an
arbitrary positive number of references. One can use <code>c()</code> to
combine bibentry objects, and hence in particular build a multiple
reference object from single reference ones. Alternatively, one can
use <code>bibentry</code> to directly create a multiple reference object by
&ldquo;vectorizing&rdquo; the given arguments, i.e., use character vectors
instead of character strings.

The <code><a href="../../base/html/print.html">print</a></code> method for bibentry objects provides a choice
between seven different styles:
plain text (style <code>"text"</code>),
BibTeX (<code>"Bibtex"</code>),
a mixture of plain text and BibTeX as traditionally used for citations
(<code>"citation"</code>),
HTML (<code>"html"</code>),
LaTeX (<code>"latex"</code>),
R code (<code>"R"</code>),
and a simple copy of the <code>textVersion</code> elements (style
<code>"textVersion"</code>).
The <code>"text"</code>, <code>"html"</code> and <code>"latex"</code> styles make use
of the <code>.bibstyle</code> argument using the <code><a href="../../tools/html/bibstyle.html">bibstyle</a></code>
function. In addition, one can use the <code>macros</code> argument to
provide additional (otherwise unknown, presumably LaTeX-style) Rd
macros, either by giving the path to a file with Rd macros to be
loaded via <code><a href="../../tools/html/loadRdMacros.html">loadRdMacros</a></code>, or an object with macros
already loaded.

When printing bibentry objects in citation style, a
<code>header</code>/<code>footer</code> for each item can be displayed as well as
a <code>mheader</code>/<code>mfooter</code> for the whole vector of references.

The <code><a href="../../base/html/print.html">print</a></code> method is based on a <code><a href="../../base/html/format.html">format</a></code>
method which provides the same styles, and for formatting as R code
a choice between giving a character vector with one <code>bibentry()</code>
call for each bibentry (as commonly used in &lsquo;CITATION&rsquo; files), or
a character string with one collapsed call, obtained by combining the
individual calls with <code>c()</code> if there is more than one bibentry.
This can be controlled by setting the option <code>collapse</code> to
<code>FALSE</code> (default) or <code>TRUE</code>, respectively. (Printing in R
style always collapses to a single call.) Further, for the
<code>"citation"</code> style, <code>format()</code>'s optional argument
<code>citation.bibtex.max</code> (with default
<code><a href="../../base/html/options.html">getOption</a>("citation.bibtex.max")</code> which defaults to 1)
determines for up to how many citation bibentries text style is shown
together with bibtex, automatically.

It is possible to subscript bibentry objects by their keys (which are
used for character subscripts if the names are <code>NULL</code>).

There is also a <code><a href="toLatex.html">toBibtex</a></code> method for direct conversion to
BibTeX.

<h3>Value</h3>

<code>bibentry</code> produces an object of class <code>"bibentry"</code>.

<h3>Entry Types</h3>

<code>bibentry</code> creates <code>"bibentry"</code> objects, which are modeled
after BibTeX entries. The entry should be a valid BibTeX entry type,
e.g.,

<dl>
<dt>Article:</dt><dd>An article from a journal or magazine.
</dd>
<dt>Book:</dt><dd>A book with an explicit publisher.
</dd>
<dt>InBook:</dt><dd>A part of a book, which may be a chapter (or section
or whatever) and/or a range of pages.
</dd>
<dt>InCollection:</dt><dd>A part of a book having its own title.
</dd>
<dt>InProceedings:</dt><dd>An article in a conference proceedings.
</dd>
<dt>Manual:</dt><dd>Technical documentation like a software manual.
</dd>
<dt>MastersThesis:</dt><dd>A Master's thesis.
</dd>
<dt>Misc:</dt><dd>Use this type when nothing else fits.
</dd>
<dt>PhdThesis:</dt><dd>A PhD thesis.
</dd>
<dt>Proceedings:</dt><dd>The proceedings of a conference.
</dd>
<dt>TechReport:</dt><dd>A report published by a school or other
institution, usually numbered within a series.
</dd>
<dt>Unpublished:</dt><dd>A document having an author and title, but not
formally published.
</dd>
</dl>

<h3>Entry Fields</h3>

The <code>...</code> argument of <code>bibentry</code> can be any number of
BibTeX fields, including

<dl>
<dt>address:</dt><dd>The address of the publisher or other type of
institution.
</dd>
<dt>author:</dt><dd>The name(s) of the author(s), either as a
<code><a href="person.html">person</a></code> object, or as a character string which
<code><a href="person.html">as.person</a></code> correctly coerces to such.
</dd>
<dt>booktitle:</dt><dd>Title of a book, part of which is being cited.
</dd>
<dt>chapter:</dt><dd>A chapter (or section or whatever) number.
</dd>
<dt>doi:</dt><dd>The DOI
(<a href="https://en.wikipedia.org/wiki/Digital_Object_Identifier">https://en.wikipedia.org/wiki/Digital_Object_Identifier</a>)
for the reference.
</dd>
<dt>editor:</dt><dd>Name(s) of editor(s), same format as <code>author</code>.
</dd>
<dt>institution:</dt><dd>The publishing institution of a technical report.
</dd>
<dt>journal:</dt><dd>A journal name.
</dd>
<dt>note:</dt><dd>Any additional information that can help the reader.
The first word should be capitalized.
</dd>
<dt>number:</dt><dd>The number of a journal, magazine, technical report,
or of a work in a series.
</dd>
<dt>pages:</dt><dd>One or more page numbers or range of numbers.
</dd>
<dt>publisher:</dt><dd>The publisher's name.
</dd>
<dt>school:</dt><dd>The name of the school where a thesis was written.
</dd>
<dt>series:</dt><dd>The name of a series or set of books.
</dd>
<dt>title:</dt><dd>The work's title.
</dd>
<dt>url:</dt><dd>A URL for the reference.
(If the URL is an expanded DOI, we recommend to use the doi
field with the unexpanded DOI instead.)
</dd>
<dt>volume:</dt><dd>The volume of a journal or multi-volume book.
</dd>
<dt>year:</dt><dd>The year of publication.
</dd>
</dl>

<code><a href="person.html">person</a></code>

<h3>Examples</h3>

<pre>
## R reference
rref &lt;- bibentry(
 bibtype = "Manual",
 title = "R: A Language and Environment for Statistical Computing",
 author = person("R Core Team"),
 organization = "R Foundation for Statistical Computing",
 address = "Vienna, Austria",
 year = 2014,
 url = "https://www.R-project.org/")

## Different printing styles
print(rref)
print(rref, style = "Bibtex")
print(rref, style = "citation")
print(rref, style = "html")
print(rref, style = "latex")
print(rref, style = "R")

## References for boot package and associated book
bref &lt;- c(
   bibentry(
     bibtype = "Manual",
     title = "boot: Bootstrap R (S-PLUS) Functions",
     author = c(
       person("Angelo", "Canty", role = "aut",
         comment = "S original"),
       person(c("Brian", "D."), "Ripley", role = c("aut", "trl", "cre"),
         comment = "R port, author of parallel support",
         email = "ripley@stats.ox.ac.uk")
     ),
     year = "2012",
     note = "R package version 1.3-4",
     url = "https://CRAN.R-project.org/package=boot",
     key = "boot-package"
   ),

bibentry(
     bibtype = "Book",
     title = "Bootstrap Methods and Their Applications",
     author = as.person("Anthony C. Davison [aut], David V. Hinkley [aut]"),
     year = "1997",
     publisher = "Cambridge University Press",
     address = "Cambridge",
     isbn = "0-521-57391-2",
     url = "http://statwww.epfl.ch/davison/BMA/",
     key = "boot-book"
   )
)

## Combining and subsetting
c(rref, bref)
bref[2]
bref["boot-book"]

## Extracting fields
bref$author
bref[1]$author
bref[1]$author[2]$email

## Convert to BibTeX
toBibtex(bref)

## Format in R style
## One bibentry() call for each bibentry:
writeLines(paste(format(bref, "R"), collapse = "\n\n"))
## One collapsed call:
writeLines(format(bref, "R", collapse = TRUE))
</pre>

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