EVOLUTION-MANAGER
Edit File: 00Index.html
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> <html xmlns="http://www.w3.org/1999/xhtml"> <head><title>R: Survival Analysis</title> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <link rel="stylesheet" type="text/css" href="R.css" /> </head><body> <h1> Survival Analysis <img class="toplogo" src="/usr/share/doc/R-3.6.0/html/Rlogo.svg" alt="[R logo]" /> </h1> <hr/> <div style="text-align: center;"> <a href="/usr/share/doc/R-3.6.0/html/packages.html"><img class="arrow" src="/usr/share/doc/R-3.6.0/html/left.jpg" alt="[Up]" /></a> <a href="/usr/share/doc/R-3.6.0/html/index.html"><img class="arrow" src="/usr/share/doc/R-3.6.0/html/up.jpg" alt="[Top]" /></a> </div><h2>Documentation for package ‘survival’ version 2.44-1.1</h2> <ul><li><a href="../DESCRIPTION">DESCRIPTION file</a>.</li> <li><a href="../doc/index.html">User guides, package vignettes and other documentation.</a></li> <li><a href="../NEWS">Package NEWS</a>.</li> </ul> <h2>Help Pages</h2> <p style="text-align: center;"> <a href="#A">A</a> <a href="#B">B</a> <a href="#C">C</a> <a href="#D">D</a> <a href="#E">E</a> <a href="#F">F</a> <a href="#G">G</a> <a href="#H">H</a> <a href="#I">I</a> <a href="#J">J</a> <a href="#K">K</a> <a href="#L">L</a> <a href="#M">M</a> <a href="#N">N</a> <a href="#O">O</a> <a href="#P">P</a> <a href="#Q">Q</a> <a href="#R">R</a> <a href="#S">S</a> <a href="#T">T</a> <a href="#U">U</a> <a href="#V">V</a> <a href="#X">X</a> <a href="#Y">Y</a> <a href="#misc">misc</a> </p> <h2><a name="A">-- A --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="aareg.html">aareg</a></td> <td>Aalen's additive regression model for censored data</td></tr> <tr><td style="width: 25%;"><a href="aeqSurv.html">aeqSurv</a></td> <td>Adjudicate near ties in a Surv object</td></tr> <tr><td style="width: 25%;"><a href="agreg.fit.html">agreg.fit</a></td> <td>Cox model fitting functions</td></tr> <tr><td style="width: 25%;"><a href="aml.html">aml</a></td> <td>Acute Myelogenous Leukemia survival data</td></tr> <tr><td style="width: 25%;"><a href="anova.coxph.html">anova.coxph</a></td> <td>Analysis of Deviance for a Cox model.</td></tr> <tr><td style="width: 25%;"><a href="anova.coxph.html">anova.coxphlist</a></td> <td>Analysis of Deviance for a Cox model.</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">anova.survreg</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">anova.survreglist</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">anyDuplicated.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">as.character.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">as.data.frame.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">as.integer.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">as.matrix.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">as.numeric.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="attrassign.html">attrassign</a></td> <td>Create new-style "assign" attribute</td></tr> <tr><td style="width: 25%;"><a href="attrassign.html">attrassign.default</a></td> <td>Create new-style "assign" attribute</td></tr> <tr><td style="width: 25%;"><a href="attrassign.html">attrassign.lm</a></td> <td>Create new-style "assign" attribute</td></tr> </table> <h2><a name="B">-- B --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="basehaz.html">basehaz</a></td> <td>Alias for the survfit function</td></tr> <tr><td style="width: 25%;"><a href="bladder.html">bladder</a></td> <td>Bladder Cancer Recurrences</td></tr> <tr><td style="width: 25%;"><a href="bladder.html">bladder1</a></td> <td>Bladder Cancer Recurrences</td></tr> <tr><td style="width: 25%;"><a href="bladder.html">bladder2</a></td> <td>Bladder Cancer Recurrences</td></tr> </table> <h2><a name="C">-- C --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="Survmethods.html">c.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="lung.html">cancer</a></td> <td>NCCTG Lung Cancer Data</td></tr> <tr><td style="width: 25%;"><a href="reliability.html">capacitor</a></td> <td>Reliability data sets</td></tr> <tr><td style="width: 25%;"><a href="cch.html">cch</a></td> <td>Fits proportional hazards regression model to case-cohort data</td></tr> <tr><td style="width: 25%;"><a href="cgd.html">cgd</a></td> <td>Chronic Granulotamous Disease data</td></tr> <tr><td style="width: 25%;"><a href="cgd.html">cgd.raw</a></td> <td>Chronic Granulotamous Disease data</td></tr> <tr><td style="width: 25%;"><a href="cgd0.html">cgd0</a></td> <td>Chronic Granulotomous Disease data</td></tr> <tr><td style="width: 25%;"><a href="cipoisson.html">cipoisson</a></td> <td>Confidence limits for the Poisson</td></tr> <tr><td style="width: 25%;"><a href="clogit.html">clogit</a></td> <td>Conditional logistic regression</td></tr> <tr><td style="width: 25%;"><a href="cluster.html">cluster</a></td> <td>Identify clusters.</td></tr> <tr><td style="width: 25%;"><a href="colon.html">colon</a></td> <td>Chemotherapy for Stage B/C colon cancer</td></tr> <tr><td style="width: 25%;"><a href="concordance.html">concordance</a></td> <td>Compute the concordance statistic for data or a model</td></tr> <tr><td style="width: 25%;"><a href="concordance.html">concordance.coxph</a></td> <td>Compute the concordance statistic for data or a model</td></tr> <tr><td style="width: 25%;"><a href="concordance.html">concordance.formula</a></td> <td>Compute the concordance statistic for data or a model</td></tr> <tr><td style="width: 25%;"><a href="concordance.html">concordance.lm</a></td> <td>Compute the concordance statistic for data or a model</td></tr> <tr><td style="width: 25%;"><a href="concordance.html">concordance.survreg</a></td> <td>Compute the concordance statistic for data or a model</td></tr> <tr><td style="width: 25%;"><a href="concordancefit.html">concordancefit</a></td> <td>Compute the concordance</td></tr> <tr><td style="width: 25%;"><a href="cox.zph.html">cox.zph</a></td> <td>Test the Proportional Hazards Assumption of a Cox Regression</td></tr> <tr><td style="width: 25%;"><a href="coxph.html">coxph</a></td> <td>Fit Proportional Hazards Regression Model</td></tr> <tr><td style="width: 25%;"><a href="coxph.control.html">coxph.control</a></td> <td>Ancillary arguments for controlling coxph fits</td></tr> <tr><td style="width: 25%;"><a href="coxph.detail.html">coxph.detail</a></td> <td>Details of a Cox Model Fit</td></tr> <tr><td style="width: 25%;"><a href="agreg.fit.html">coxph.fit</a></td> <td>Cox model fitting functions</td></tr> <tr><td style="width: 25%;"><a href="coxph.html">coxph.getdata</a></td> <td>Fit Proportional Hazards Regression Model</td></tr> <tr><td style="width: 25%;"><a href="coxph.object.html">coxph.object</a></td> <td>Proportional Hazards Regression Object</td></tr> <tr><td style="width: 25%;"><a href="coxph.html">coxph.penalty</a></td> <td>Fit Proportional Hazards Regression Model</td></tr> <tr><td style="width: 25%;"><a href="coxph.wtest.html">coxph.wtest</a></td> <td>Compute a quadratic form</td></tr> <tr><td style="width: 25%;"><a href="reliability.html">cracks</a></td> <td>Reliability data sets</td></tr> </table> <h2><a name="D">-- D --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="diabetic.html">diabetic</a></td> <td>Ddiabetic retinopathy</td></tr> <tr><td style="width: 25%;"><a href="dsurvreg.html">dsurvreg</a></td> <td>Distributions available in survreg.</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">duplicated.Surv</a></td> <td>Methods for Surv objects</td></tr> </table> <h2><a name="E">-- E --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="coxph.object.html">extractAIC.coxph.penal</a></td> <td>Proportional Hazards Regression Object</td></tr> </table> <h2><a name="F">-- F --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="finegray.html">finegray</a></td> <td>Create data for a Fine-Gray model</td></tr> <tr><td style="width: 25%;"><a href="flchain.html">flchain</a></td> <td>Assay of serum free light chain for 7874 subjects.</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">format.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="frailty.html">frailty</a></td> <td>Random effects terms</td></tr> <tr><td style="width: 25%;"><a href="frailty.html">frailty.gamma</a></td> <td>Random effects terms</td></tr> <tr><td style="width: 25%;"><a href="frailty.html">frailty.gaussian</a></td> <td>Random effects terms</td></tr> <tr><td style="width: 25%;"><a href="frailty.html">frailty.t</a></td> <td>Random effects terms</td></tr> </table> <h2><a name="G">-- G --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="reliability.html">genfan</a></td> <td>Reliability data sets</td></tr> </table> <h2><a name="H">-- H --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="Survmethods.html">head.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="heart.html">heart</a></td> <td>Stanford Heart Transplant data</td></tr> </table> <h2><a name="I">-- I --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="reliability.html">ifluid</a></td> <td>Reliability data sets</td></tr> <tr><td style="width: 25%;"><a href="reliability.html">imotor</a></td> <td>Reliability data sets</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">is.na.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="is.ratetable.html">is.ratetable</a></td> <td>Verify that an object is of class ratetable.</td></tr> <tr><td style="width: 25%;"><a href="Surv.html">is.Surv</a></td> <td>Create a Survival Object</td></tr> </table> <h2><a name="J">-- J --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="heart.html">jasa</a></td> <td>Stanford Heart Transplant data</td></tr> <tr><td style="width: 25%;"><a href="heart.html">jasa1</a></td> <td>Stanford Heart Transplant data</td></tr> </table> <h2><a name="K">-- K --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="kidney.html">kidney</a></td> <td>Kidney catheter data</td></tr> </table> <h2><a name="L">-- L --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="survreg.html">labels.survreg</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">length.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="aml.html">leukemia</a></td> <td>Acute Myelogenous Leukemia survival data</td></tr> <tr><td style="width: 25%;"><a href="levels.Surv.html">levels.Surv</a></td> <td>Return the states of a multi-state Surv object</td></tr> <tr><td style="width: 25%;"><a href="tcut.html">levels.tcut</a></td> <td>Factors for person-year calculations</td></tr> <tr><td style="width: 25%;"><a href="lines.survfit.html">lines.survexp</a></td> <td>Add Lines or Points to a Survival Plot</td></tr> <tr><td style="width: 25%;"><a href="lines.survfit.html">lines.survfit</a></td> <td>Add Lines or Points to a Survival Plot</td></tr> <tr><td style="width: 25%;"><a href="logan.html">logan</a></td> <td>Data from the 1972-78 GSS data used by Logan</td></tr> <tr><td style="width: 25%;"><a href="logLik.coxph.html">logLik.coxph</a></td> <td>logLik method for a Cox model</td></tr> <tr><td style="width: 25%;"><a href="logLik.coxph.html">logLik.survreg</a></td> <td>logLik method for a Cox model</td></tr> <tr><td style="width: 25%;"><a href="lung.html">lung</a></td> <td>NCCTG Lung Cancer Data</td></tr> </table> <h2><a name="M">-- M --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="is.ratetable.html">Math.ratetable</a></td> <td>Verify that an object is of class ratetable.</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">Math.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">mean.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">median.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="mgus.html">mgus</a></td> <td>Monoclonal gammopathy data</td></tr> <tr><td style="width: 25%;"><a href="mgus.html">mgus1</a></td> <td>Monoclonal gammopathy data</td></tr> <tr><td style="width: 25%;"><a href="mgus2.html">mgus2</a></td> <td>Monoclonal gammopathy data</td></tr> <tr><td style="width: 25%;"><a href="model.frame.coxph.html">model.frame.coxph</a></td> <td>Model.frame method for coxph objects</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">model.frame.survreg</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="model.matrix.coxph.html">model.matrix.coxph</a></td> <td>Model.matrix method for coxph models</td></tr> <tr><td style="width: 25%;"><a href="myeloid.html">myeloid</a></td> <td>Acute myeloid leukemia</td></tr> </table> <h2><a name="N">-- N --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="Survmethods.html">names.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">names<-.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="neardate.html">neardate</a></td> <td>Find the index of the closest value in data set 2, for each entry in data set one.</td></tr> <tr><td style="width: 25%;"><a href="nwtco.html">nwtco</a></td> <td>Data from the National Wilm's Tumor Study</td></tr> </table> <h2><a name="O">-- O --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="is.ratetable.html">Ops.ratetable</a></td> <td>Verify that an object is of class ratetable.</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">Ops.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="xtfrm.Surv.html">order.Surv</a></td> <td>Sorting order for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="ovarian.html">ovarian</a></td> <td>Ovarian Cancer Survival Data</td></tr> </table> <h2><a name="P">-- P --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="pbc.html">pbc</a></td> <td>Mayo Clinic Primary Biliary Cirrhosis Data</td></tr> <tr><td style="width: 25%;"><a href="pbcseq.html">pbcseq</a></td> <td>Mayo Clinic Primary Biliary Cirrhosis, sequential data</td></tr> <tr><td style="width: 25%;"><a href="plot.aareg.html">plot.aareg</a></td> <td>Plot an aareg object.</td></tr> <tr><td style="width: 25%;"><a href="plot.cox.zph.html">plot.cox.zph</a></td> <td>Graphical Test of Proportional Hazards</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">plot.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="plot.survfit.html">plot.survfit</a></td> <td>Plot method for 'survfit' objects</td></tr> <tr><td style="width: 25%;"><a href="lines.survfit.html">points.survfit</a></td> <td>Add Lines or Points to a Survival Plot</td></tr> <tr><td style="width: 25%;"><a href="predict.coxph.html">predict.coxph</a></td> <td>Predictions for a Cox model</td></tr> <tr><td style="width: 25%;"><a href="predict.coxph.html">predict.coxph.penal</a></td> <td>Predictions for a Cox model</td></tr> <tr><td style="width: 25%;"><a href="predict.survreg.html">predict.survreg</a></td> <td>Predicted Values for a 'survreg' Object</td></tr> <tr><td style="width: 25%;"><a href="predict.survreg.html">predict.survreg.penal</a></td> <td>Predicted Values for a 'survreg' Object</td></tr> <tr><td style="width: 25%;"><a href="print.aareg.html">print.aareg</a></td> <td>Print an aareg object</td></tr> <tr><td style="width: 25%;"><a href="cox.zph.html">print.cox.zph</a></td> <td>Test the Proportional Hazards Assumption of a Cox Regression</td></tr> <tr><td style="width: 25%;"><a href="coxph.object.html">print.coxph</a></td> <td>Proportional Hazards Regression Object</td></tr> <tr><td style="width: 25%;"><a href="coxph.html">print.coxph.null</a></td> <td>Fit Proportional Hazards Regression Model</td></tr> <tr><td style="width: 25%;"><a href="coxph.html">print.coxph.penal</a></td> <td>Fit Proportional Hazards Regression Model</td></tr> <tr><td style="width: 25%;"><a href="ratetable.html">print.ratetable</a></td> <td>Rate table structure</td></tr> <tr><td style="width: 25%;"><a href="print.summary.coxph.html">print.summary.coxph</a></td> <td>Print method for summary.coxph objects</td></tr> <tr><td style="width: 25%;"><a href="print.summary.survexp.html">print.summary.survexp</a></td> <td>Print Survexp Summary</td></tr> <tr><td style="width: 25%;"><a href="print.summary.survfit.html">print.summary.survfit</a></td> <td>Print Survfit Summary</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">print.summary.survreg</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="survdiff.html">print.survdiff</a></td> <td>Test Survival Curve Differences</td></tr> <tr><td style="width: 25%;"><a href="survexp.html">print.survexp</a></td> <td>Compute Expected Survival</td></tr> <tr><td style="width: 25%;"><a href="print.survfit.html">print.survfit</a></td> <td>Print a Short Summary of a Survival Curve</td></tr> <tr><td style="width: 25%;"><a href="survreg.object.html">print.survreg</a></td> <td>Parametric Survival Model Object</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">print.survreg.penal</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="pspline.html">pspline</a></td> <td>Smoothing splines using a pspline basis</td></tr> <tr><td style="width: 25%;"><a href="pspline.html">psplineinverse</a></td> <td>Smoothing splines using a pspline basis</td></tr> <tr><td style="width: 25%;"><a href="dsurvreg.html">psurvreg</a></td> <td>Distributions available in survreg.</td></tr> <tr><td style="width: 25%;"><a href="pyears.html">pyears</a></td> <td>Person Years</td></tr> </table> <h2><a name="Q">-- Q --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="dsurvreg.html">qsurvreg</a></td> <td>Distributions available in survreg.</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">quantile.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="quantile.survfit.html">quantile.survfit</a></td> <td>Quantiles from a survfit object</td></tr> <tr><td style="width: 25%;"><a href="quantile.survfit.html">quantile.survfitms</a></td> <td>Quantiles from a survfit object</td></tr> </table> <h2><a name="R">-- R --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="ratetable.html">ratetable</a></td> <td>Rate table structure</td></tr> <tr><td style="width: 25%;"><a href="ratetableDate.html">ratetableDate</a></td> <td>Convert date objects to ratetable form</td></tr> <tr><td style="width: 25%;"><a href="rats.html">rats</a></td> <td>Rat treatment data from Mantel et al</td></tr> <tr><td style="width: 25%;"><a href="rats2.html">rats2</a></td> <td>Rat data from Gail et al.</td></tr> <tr><td style="width: 25%;"><a href="reliability.html">reliability</a></td> <td>Reliability data sets</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">rep.int.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">rep.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">rep_len.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="residuals.coxph.html">residuals.coxph</a></td> <td>Calculate Residuals for a 'coxph' Fit</td></tr> <tr><td style="width: 25%;"><a href="residuals.coxph.html">residuals.coxph.null</a></td> <td>Calculate Residuals for a 'coxph' Fit</td></tr> <tr><td style="width: 25%;"><a href="residuals.coxph.html">residuals.coxph.penal</a></td> <td>Calculate Residuals for a 'coxph' Fit</td></tr> <tr><td style="width: 25%;"><a href="residuals.survreg.html">residuals.survreg</a></td> <td>Compute Residuals for 'survreg' Objects</td></tr> <tr><td style="width: 25%;"><a href="residuals.survreg.html">residuals.survreg.penal</a></td> <td>Compute Residuals for 'survreg' Objects</td></tr> <tr><td style="width: 25%;"><a href="retinopathy.html">retinopathy</a></td> <td>Diabetic Retinopathy</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">rev.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="rhDNase.html">rhDNase</a></td> <td>rhDNASE data set</td></tr> <tr><td style="width: 25%;"><a href="ridge.html">ridge</a></td> <td>Ridge regression</td></tr> <tr><td style="width: 25%;"><a href="dsurvreg.html">rsurvreg</a></td> <td>Distributions available in survreg.</td></tr> </table> <h2><a name="S">-- S --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="solder.html">solder</a></td> <td>Data from a soldering experiment</td></tr> <tr><td style="width: 25%;"><a href="xtfrm.Surv.html">sort.Surv</a></td> <td>Sorting order for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="stanford2.html">stanford2</a></td> <td>More Stanford Heart Transplant data</td></tr> <tr><td style="width: 25%;"><a href="statefig.html">statefig</a></td> <td>Draw a state space figure.</td></tr> <tr><td style="width: 25%;"><a href="strata.html">strata</a></td> <td>Identify Stratification Variables</td></tr> <tr><td style="width: 25%;"><a href="summary.aareg.html">summary.aareg</a></td> <td>Summarize an aareg fit</td></tr> <tr><td style="width: 25%;"><a href="summary.coxph.html">summary.coxph</a></td> <td>Summary method for Cox models</td></tr> <tr><td style="width: 25%;"><a href="coxph.html">summary.coxph.penal</a></td> <td>Fit Proportional Hazards Regression Model</td></tr> <tr><td style="width: 25%;"><a href="summary.pyears.html">summary.pyears</a></td> <td>Summary function for pyears objecs</td></tr> <tr><td style="width: 25%;"><a href="ratetable.html">summary.ratetable</a></td> <td>Rate table structure</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">Summary.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="summary.survexp.html">summary.survexp</a></td> <td>Summary function for a survexp object</td></tr> <tr><td style="width: 25%;"><a href="summary.survfit.html">summary.survfit</a></td> <td>Summary of a Survival Curve</td></tr> <tr><td style="width: 25%;"><a href="survreg.object.html">summary.survreg</a></td> <td>Parametric Survival Model Object</td></tr> <tr><td style="width: 25%;"><a href="Surv.html">Surv</a></td> <td>Create a Survival Object</td></tr> <tr><td style="width: 25%;"><a href="survConcordance-deprecated.html">survConcordance</a></td> <td>Compute a concordance measure.</td></tr> <tr><td style="width: 25%;"><a href="survConcordance-deprecated.html">survConcordance.fit</a></td> <td>Compute a concordance measure.</td></tr> <tr><td style="width: 25%;"><a href="survdiff.html">survdiff</a></td> <td>Test Survival Curve Differences</td></tr> <tr><td style="width: 25%;"><a href="survexp.html">survexp</a></td> <td>Compute Expected Survival</td></tr> <tr><td style="width: 25%;"><a href="survexp.fit.html">survexp.fit</a></td> <td>Compute Expected Survival</td></tr> <tr><td style="width: 25%;"><a href="survexp.us.html">survexp.mn</a></td> <td>Census Data Sets for the Expected Survival and Person Years Functions</td></tr> <tr><td style="width: 25%;"><a href="survexp.object.html">survexp.object</a></td> <td>Expected Survival Curve Object</td></tr> <tr><td style="width: 25%;"><a href="survexp.us.html">survexp.us</a></td> <td>Census Data Sets for the Expected Survival and Person Years Functions</td></tr> <tr><td style="width: 25%;"><a href="survexp.us.html">survexp.usr</a></td> <td>Census Data Sets for the Expected Survival and Person Years Functions</td></tr> <tr><td style="width: 25%;"><a href="survfit.html">survfit</a></td> <td>Create survival curves</td></tr> <tr><td style="width: 25%;"><a href="survfit.coxph.html">survfit.coxph</a></td> <td>Compute a Survival Curve from a Cox model</td></tr> <tr><td style="width: 25%;"><a href="survfit.formula.html">survfit.formula</a></td> <td>Compute a Survival Curve for Censored Data</td></tr> <tr><td style="width: 25%;"><a href="survfit.matrix.html">survfit.matrix</a></td> <td>Create Aalen-Johansen estimates of multi-state survival from a matrix of hazards.</td></tr> <tr><td style="width: 25%;"><a href="survfit.object.html">survfit.object</a></td> <td>Survival Curve Object</td></tr> <tr><td style="width: 25%;"><a href="survfitcoxph.fit.html">survfitcoxph.fit</a></td> <td>A direct interface to the 'computational engine' of survfit.coxph</td></tr> <tr><td style="width: 25%;"><a href="survfit.object.html">survfitms.object</a></td> <td>Survival Curve Object</td></tr> <tr><td style="width: 25%;"><a href="survobrien.html">survobrien</a></td> <td>O'Brien's Test for Association of a Single Variable with Survival</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">survReg</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="survreg.html">survreg</a></td> <td>Regression for a Parametric Survival Model</td></tr> <tr><td style="width: 25%;"><a href="survreg.control.html">survreg.control</a></td> <td>Package options for survreg and coxph</td></tr> <tr><td style="width: 25%;"><a href="survreg.distributions.html">survreg.distributions</a></td> <td>Parametric Survival Distributions</td></tr> <tr><td style="width: 25%;"><a href="survreg.object.html">survreg.object</a></td> <td>Parametric Survival Model Object</td></tr> <tr><td style="width: 25%;"><a href="survregDtest.html">survregDtest</a></td> <td>Verify a survreg distribution</td></tr> <tr><td style="width: 25%;"><a href="survSplit.html">survSplit</a></td> <td>Split a survival data set at specified times</td></tr> </table> <h2><a name="T">-- T --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="Survmethods.html">t.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">tail.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="tcut.html">tcut</a></td> <td>Factors for person-year calculations</td></tr> <tr><td style="width: 25%;"><a href="tmerge.html">tmerge</a></td> <td>Time based merge for survival data</td></tr> <tr><td style="width: 25%;"><a href="tobin.html">tobin</a></td> <td>Tobin's Tobit data</td></tr> <tr><td style="width: 25%;"><a href="transplant.html">transplant</a></td> <td>Liver transplant waiting list</td></tr> <tr><td style="width: 25%;"><a href="transplant.html">transplant2</a></td> <td>Liver transplant waiting list</td></tr> <tr><td style="width: 25%;"><a href="reliability.html">turbine</a></td> <td>Reliability data sets</td></tr> </table> <h2><a name="U">-- U --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="udca.html">udca</a></td> <td>Data from a trial of usrodeoxycholic acid</td></tr> <tr><td style="width: 25%;"><a href="udca.html">udca1</a></td> <td>Data from a trial of usrodeoxycholic acid</td></tr> <tr><td style="width: 25%;"><a href="udca.html">udca2</a></td> <td>Data from a trial of usrodeoxycholic acid</td></tr> <tr><td style="width: 25%;"><a href="Survmethods.html">unique.Surv</a></td> <td>Methods for Surv objects</td></tr> <tr><td style="width: 25%;"><a href="untangle.specials.html">untangle.specials</a></td> <td>Help Process the 'specials' Argument of the 'terms' Function.</td></tr> <tr><td style="width: 25%;"><a href="uspop2.html">uspop2</a></td> <td>Projected US Population</td></tr> </table> <h2><a name="V">-- V --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="reliability.html">valveSeat</a></td> <td>Reliability data sets</td></tr> <tr><td style="width: 25%;"><a href="vcov.coxph.html">vcov.coxph</a></td> <td>Variance-covariance matrix</td></tr> <tr><td style="width: 25%;"><a href="vcov.coxph.html">vcov.survreg</a></td> <td>Variance-covariance matrix</td></tr> <tr><td style="width: 25%;"><a href="veteran.html">veteran</a></td> <td>Veterans' Administration Lung Cancer study</td></tr> </table> <h2><a name="X">-- X --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="xtfrm.Surv.html">xtfrm.Surv</a></td> <td>Sorting order for Surv objects</td></tr> </table> <h2><a name="Y">-- Y --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="yates.html">yates</a></td> <td>Population prediction</td></tr> <tr><td style="width: 25%;"><a href="yates_setup.html">yates_setup</a></td> <td>Method for adding new models to the 'yates' function.</td></tr> </table> <h2><a name="misc">-- misc --</a></h2> <table width="100%"> <tr><td style="width: 25%;"><a href="cox.zph.html">[.cox.zph</a></td> <td>Test the Proportional Hazards Assumption of a Cox Regression</td></tr> <tr><td style="width: 25%;"><a href="ratetable.html">[.ratetable</a></td> <td>Rate table structure</td></tr> <tr><td style="width: 25%;"><a href="Surv.html">[.Surv</a></td> <td>Create a Survival Object</td></tr> <tr><td style="width: 25%;"><a href="survfit.formula.html">[.survfit</a></td> <td>Compute a Survival Curve for Censored Data</td></tr> <tr><td style="width: 25%;"><a href="tcut.html">[.tcut</a></td> <td>Factors for person-year calculations</td></tr> </table> </body></html>