EVOLUTION-MANAGER
Edit File: summary.map.html
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml"><head><title>R: Print summary of a genetic map</title> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <link rel="stylesheet" type="text/css" href="R.css" /> </head><body> <table width="100%" summary="page for summaryMap {qtl}"><tr><td>summaryMap {qtl}</td><td style="text-align: right;">R Documentation</td></tr></table> <h2>Print summary of a genetic map</h2> <h3>Description</h3> <p>Print summary information about a <code>map</code> object. </p> <h3>Usage</h3> <pre> ## S3 method for class 'map' summary(object, ...) summaryMap(object, ...) </pre> <h3>Arguments</h3> <table summary="R argblock"> <tr valign="top"><td><code>object</code></td> <td> <p>An object of class <code>map</code>, which is a list of vectors (or, for a sex-specific map, 2-row matrices), each specifying the locations of the markers. The object can also be of class <code>cross</code>, in which case the function <code><a href="pull.map.html">pull.map</a></code> is used to extract the genetic map from the object.</p> </td></tr> <tr valign="top"><td><code>...</code></td> <td> <p>Ignored at this point.</p> </td></tr> </table> <h3>Value</h3> <p>An object of class <code>summary.map</code>, which is just a data.frame containing the number of markers, length, the average inter-marker spacing, and the maximum distance between markers, for each chromosome and overall. An attribute <code>sexsp</code> indicates whether the map was sex-specific. </p> <h3>Author(s)</h3> <p>Karl W Broman, <a href="mailto:broman@wisc.edu">broman@wisc.edu</a> </p> <h3>See Also</h3> <p><code><a href="chrlen.html">chrlen</a></code>, <code><a href="pull.map.html">pull.map</a></code>, <code><a href="summary.cross.html">summary.cross</a></code> </p> <h3>Examples</h3> <pre> data(map10) summary(map10) </pre> <hr /><div style="text-align: center;">[Package <em>qtl</em> version 1.46-2 <a href="00Index.html">Index</a>]</div> </body></html>