EVOLUTION-MANAGER
Edit File: find_large_intervals.html
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml"><head><title>R: Find large intervals in a map</title> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <link rel="stylesheet" type="text/css" href="R.css" /> </head><body> <table width="100%" summary="page for find_large_intervals {qtl}"><tr><td>find_large_intervals {qtl}</td><td style="text-align: right;">R Documentation</td></tr></table> <h2>Find large intervals in a map</h2> <h3>Description</h3> <p>Find large inter-marker intervals in a map. </p> <h3>Usage</h3> <pre> find_large_intervals(map, min_length=35) </pre> <h3>Arguments</h3> <table summary="R argblock"> <tr valign="top"><td><code>map</code></td> <td> <p>A list of numeric vectors; each component is a chromosome with the positions of markers on that chromosome. Can also be an object of class <code>cross</code>, in which case <code><a href="pull.map.html">pull.map</a></code> is used.</p> </td></tr> <tr valign="top"><td><code>min_length</code></td> <td> <p>Minimum length of interval to be flagged.</p> </td></tr> </table> <h3>Value</h3> <p>Data frame with chromosome, left and right markers and interval length. </p> <h3>Author(s)</h3> <p>Karl W Broman, <a href="mailto:broman@wisc.edu">broman@wisc.edu</a></p> <h3>See Also</h3> <p><code><a href="summary.map.html">summaryMap</a></code> </p> <h3>Examples</h3> <pre> data(fake.f2) find_large_intervals(fake.f2, 30) </pre> <hr /><div style="text-align: center;">[Package <em>qtl</em> version 1.66 <a href="00Index.html">Index</a>]</div> </body></html>