EVOLUTION-MANAGER
Edit File: gather.hpp
// Copyright (C) 2005, 2006 Douglas Gregor. // Use, modification and distribution is subject to the Boost Software // License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at // http://www.boost.org/LICENSE_1_0.txt) // Message Passing Interface 1.1 -- Section 4.5. Gather #ifndef BOOST_MPI_GATHER_HPP #define BOOST_MPI_GATHER_HPP #include <cassert> #include <cstddef> #include <numeric> #include <boost/mpi/exception.hpp> #include <boost/mpi/datatype.hpp> #include <vector> #include <boost/mpi/packed_oarchive.hpp> #include <boost/mpi/packed_iarchive.hpp> #include <boost/mpi/detail/point_to_point.hpp> #include <boost/mpi/communicator.hpp> #include <boost/mpi/environment.hpp> #include <boost/mpi/detail/offsets.hpp> #include <boost/mpi/detail/antiques.hpp> #include <boost/assert.hpp> namespace boost { namespace mpi { namespace detail { // We're gathering at the root for a type that has an associated MPI // datatype, so we'll use MPI_Gather to do all of the work. template<typename T> void gather_impl(const communicator& comm, const T* in_values, int n, T* out_values, int root, mpl::true_) { MPI_Datatype type = get_mpi_datatype<T>(*in_values); BOOST_MPI_CHECK_RESULT(MPI_Gather, (const_cast<T*>(in_values), n, type, out_values, n, type, root, comm)); } // We're gathering from a non-root for a type that has an associated MPI // datatype, so we'll use MPI_Gather to do all of the work. template<typename T> void gather_impl(const communicator& comm, const T* in_values, int n, int root, mpl::true_ is_mpi_type) { assert(comm.rank() != root); gather_impl(comm, in_values, n, (T*)0, root, is_mpi_type); } // We're gathering at the root for a type that does not have an // associated MPI datatype, so we'll need to serialize // it. template<typename T> void gather_impl(const communicator& comm, const T* in_values, int n, T* out_values, int const* nslot, int const* nskip, int root, mpl::false_) { int nproc = comm.size(); // first, gather all size, these size can be different for // each process packed_oarchive oa(comm); for (int i = 0; i < n; ++i) { oa << in_values[i]; } bool is_root = comm.rank() == root; std::vector<int> oasizes(is_root ? nproc : 0); int oasize = oa.size(); BOOST_MPI_CHECK_RESULT(MPI_Gather, (&oasize, 1, MPI_INT, c_data(oasizes), 1, MPI_INT, root, MPI_Comm(comm))); // Gather the archives, which can be of different sizes, so // we need to use gatherv. // Everything is contiguous (in the transmitted archive), so // the offsets can be deduced from the collected sizes. std::vector<int> offsets; if (is_root) sizes2offsets(oasizes, offsets); packed_iarchive::buffer_type recv_buffer(is_root ? std::accumulate(oasizes.begin(), oasizes.end(), 0) : 0); BOOST_MPI_CHECK_RESULT(MPI_Gatherv, (const_cast<void*>(oa.address()), int(oa.size()), MPI_BYTE, c_data(recv_buffer), c_data(oasizes), c_data(offsets), MPI_BYTE, root, MPI_Comm(comm))); if (is_root) { for (int src = 0; src < nproc; ++src) { // handle variadic case int nb = nslot ? nslot[src] : n; int skip = nskip ? nskip[src] : 0; std::advance(out_values, skip); if (src == root) { BOOST_ASSERT(nb == n); for (int i = 0; i < nb; ++i) { *out_values++ = *in_values++; } } else { packed_iarchive ia(comm, recv_buffer, boost::archive::no_header, offsets[src]); for (int i = 0; i < nb; ++i) { ia >> *out_values++; } } } } } // We're gathering at a non-root for a type that does not have an // associated MPI datatype, so we'll need to serialize // it. template<typename T> void gather_impl(const communicator& comm, const T* in_values, int n, T* out_values,int root, mpl::false_ is_mpi_type) { gather_impl(comm, in_values, n, out_values, (int const*)0, (int const*)0, root, is_mpi_type); } } // end namespace detail template<typename T> void gather(const communicator& comm, const T& in_value, T* out_values, int root) { BOOST_ASSERT(out_values || (comm.rank() != root)); detail::gather_impl(comm, &in_value, 1, out_values, root, is_mpi_datatype<T>()); } template<typename T> void gather(const communicator& comm, const T& in_value, int root) { BOOST_ASSERT(comm.rank() != root); detail::gather_impl(comm, &in_value, 1, (T*)0, root, is_mpi_datatype<T>()); } template<typename T> void gather(const communicator& comm, const T& in_value, std::vector<T>& out_values, int root) { using detail::c_data; if (comm.rank() == root) { out_values.resize(comm.size()); } ::boost::mpi::gather(comm, in_value, c_data(out_values), root); } template<typename T> void gather(const communicator& comm, const T* in_values, int n, T* out_values, int root) { detail::gather_impl(comm, in_values, n, out_values, root, is_mpi_datatype<T>()); } template<typename T> void gather(const communicator& comm, const T* in_values, int n, std::vector<T>& out_values, int root) { if (comm.rank() == root) { out_values.resize(comm.size() * n); } ::boost::mpi::gather(comm, in_values, n, out_values.data(), root); } template<typename T> void gather(const communicator& comm, const T* in_values, int n, int root) { BOOST_ASSERT(comm.rank() != root); detail::gather_impl(comm, in_values, n, root, is_mpi_datatype<T>()); } } } // end namespace boost::mpi #endif // BOOST_MPI_GATHER_HPP